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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789213.1_cds_XP_016495275.1_902
CDS Infomation

[gene=LOC107814374] [db_xref=GeneID:107814374] [protein=aspartic proteinase CDR1-like] [protein_id=XP_016495275.1] [location=651..2003] [gbkey=CDS]
Sequence

ATGAAAATGAATACTAAAGCTAGTACTCTCTTTCCTACATTTGTCTTCTTAGCTATTTTT
CACCTTTCTTTGGTTTTTTGTCGCAAAATAATAAGCAATTGTGATGGAAGTGGCTTCACT
CTTGATCTTATCCATCGCGATTCTCCTCTTTCGCCTTACTACAACCCATCAATTACTCAT
TCAAAACGCCTACGAAACGCCTTCCTTCGATCATTTTCAAGGGAATCTTTTTTCAAGAAA
AGTAATGATACAATCCAATCGGATATTATTCCGATCCCAGGAGAATATCTCATGAAAATT
TCCATTGGAACTCCACCATTTGAAATTGTAGCCATAGCTGATACTGGTAGTGACTTAACA
TGGACACAATGTAAGCCTTGCACTAATTGTTTCAAACAAACAGCCCCTATTTTTGATTCC
AGAAAAAGCTCTACATATAAAACCATAGGGTGTAATGCTGAAGAATGTGCATTACTAGGG
ACTTCTTCTTGTGTTAGAGGAAATATTTGTGAATATCAAATGAGTTATGGTGACCAATCA
CAAACTATTGGTGATCTTGCTTTTGAAAAATTCACATTTCCTTCTACTTCTGGAAATAAT
GTTTCCATTCCTAATGTTGTGTTTGGTTGTGGTCATGACAATAGTGGCACATTCAATAAT
TATACTTCTGGTATTATTGGCTTAGGTGGTGGTGAAGTCTCAATTGTCAACCAATTGGAT
AAACAAATCAAAGGGAAATTCTCTTATTGTTTAATCCCAATAGAATTACAATCATCTATT
TCCAATGCCACAAGTCACATCAACTTTGGTAATAGTGCCACTGTATCTGGTCGTGACGTC
GTTTCAACTCCCCTGATAAAAAAAGAACCGTCCACGTTCTACTATCTAAATTTGGAAGGT
ATCACCGTTGGGAATAAGAGGGTGGAATTCAAATCTTCCAACCTTGCTTCTTCTAATGCT
TTTGATGGTGATGAAGGTAACATTATAATTGATTCTGGTACGACGTTGACTTTTTTACCT
AATGATTTTTACTTGAATTTGGAGTCGATATTGTTGGAATCGATCAATGCTACTAGGATT
GATGATCCTTCGGGCACTTTTGGTATCTGTTACGAGTCTAAGAATGGTACTATTGATGCT
CCCAAAATTGTCGCGCATTTTACTGATGCAGATTTAGTGTTGGCGCCTTCGAGCACTTTT
GCAGAAGTAGAGGAAGGTTTGGTTTGTCTTACATTAGTACCAGCAGAGCAAATTGCTATT
TTTGGAAACTTGGCACAGGCCAATTTCCTAATTGGATATGATCTTGTTGATAACAAAGTC
TCTTTCAAGCCTACAGATTGCACTAAGTACTAA

Peptide Sequence

PEP ID

XP_016495275.1
PEP Infomation

PREDICTED: aspartic proteinase CDR1-like [Nicotiana tabacum]
Sequence

MKMNTKASTLFPTFVFLAIFHLSLVFCRKIISNCDGSGFTLDLIHRDSPLSPYYNPSITH
SKRLRNAFLRSFSRESFFKKSNDTIQSDIIPIPGEYLMKISIGTPPFEIVAIADTGSDLT
WTQCKPCTNCFKQTAPIFDSRKSSTYKTIGCNAEECALLGTSSCVRGNICEYQMSYGDQS
QTIGDLAFEKFTFPSTSGNNVSIPNVVFGCGHDNSGTFNNYTSGIIGLGGGEVSIVNQLD
KQIKGKFSYCLIPIELQSSISNATSHINFGNSATVSGRDVVSTPLIKKEPSTFYYLNLEG
ITVGNKRVEFKSSNLASSNAFDGDEGNIIIDSGTTLTFLPNDFYLNLESILLESINATRI
DDPSGTFGICYESKNGTIDAPKIVAHFTDADLVLAPSSTFAEVEEGLVCLTLVPAEQIAI
FGNLAQANFLIGYDLVDNKVSFKPTDCTKY

Transcript Sequence

Gene sequence data has not been registered.